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Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from the human gut microbiome. Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and … Reveal Thousands of Small, Novel Genes. Cell 178(5):1245-1259 Nayfach S, et al, (2019) New insights from …

… plants did you all look at? Avinash: We started off with 12 plants, which are JGI Flagship Plants, mostly related to … Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental …

… the number of known high quality virophage genome sequences 10-fold through computational approaches. By mining more … genome size range from 13.8-29.3 kilobases (Kb) to 10.9-42.3 Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, “we provide a global …

This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many …

… by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … Marker genes for diverse methane metabolisms Of the 10 MAGs reconstructed in the study, five were from …

… to generate the sequences of these three chromosomes. In 2004, they published the sequences of these three chromosomes. These sequences account for approximately 12% of the total human genome, which itself was finally … of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., Martin, J., Terry, A. et …

… for protecting these ecosystems. … The work (proposal no. 10.46936/10.25585/60001030) (A.J.S.) conducted by the US … of Energy (DOE) Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported under contract no. DE-AC02-05CH11231. …

Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and plasticity in bacterial gene regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria … Phosphate from Phytate. Appl Environ Microbiol 85(18):e01210-19 Price et al 2018. Mutant phenotypes for thousands of …

… with 824 Isolate Reference Genomes. Cell Genomics 2: 100213Nayfach S et al. 2021. A genomic catalog of Earth’s … Big Idea for STEM Education and Antibiotic Discovery. mBio. 12:e03432-20 Wood-Charlson EM et al. 2020. The National … in undomesticated bacteria. Nat Microbiol. 4: 2498-2510 Mouncey NJ et al. 2019. New voyages to explore the …

… giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … viruses, while the genomes of large viruses may be only 10 times larger. And yet, while they are found everywhere, … As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in …