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… wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant … of the continental United States, occasionally pulling over to the side of the road to collect small weedy plants and … and they were all assembled de novo, which let the team look at presence/absence of whole genes,” Kellogg agreed. …

… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to … (LCMS).  We do a hydrolyzation of the DNA and we look and quantify the isotopomers. We estimate the overall …

… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program …

… Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to help train the next generation of scientists. She shares … metabolism within the Florida Everglades. They decided to look at the predominant taxa and the abundance of genes …

… the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than ever before. In … — that’s three-quadrillion base pairs of DNA sequence! To meet this “ data tsunami ,” as Kathy Yelick of the … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … the JGI has really motivated me to think outside of simply looking for jobs/postdocs in industry or academia. It was … One of my favorite thing about my JGI internship was the learning experience I got in computational research. …

… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI … Proposers are encouraged to review the JGI’s sample requirements . Samples that are … For general questions, please reach out to Christa Pennacchio, Project Management Office. For …

… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological … Proposers are encouraged to review the JGI’s sample requirements . Samples that are … For general questions, please reach out to Christa Pennacchio, Project Management Office. For …

… fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept oomycetes to be proposed for genome sequencing, or only “true fungi”? … 20.  Q: When displaying protein info, is there any way to look for this ID but in a different strain assembly (same …

… biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research (BER) program … any aspect of these mission areas, priority will be given to projects that address the areas of special emphasis that … metabolomics and analysis will be provided for free to the PI by the Department of Energy’s funding of the JGI. …

… Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find novel functions that may impact microbiome structure … Nature Biotechnology 37, 29–37. Schulz et al. (2017) Towards a balanced view of the bacterial tree of life. …

… Genomics & Metagenomics Workshop The workshop is addressed to students and professionals of biology, biomedical … health sciences and related fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …