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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … a fellow Berkeley professor from the De­partments of Earth and Planetary Science and Environmental Science, … Tyson GW et al. Community structure and metabolism through reconstruction of microbial genomes from …
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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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Viral Genomics Group
… measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question … towards specific phages and/or hosts. To that end, the JGI Viral Genomics group is exploring different approaches … The JGI Viral Genomics group is leading and/or contributing to …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has desirable … his colleagues had identified 1,110 genes involved in lipid metabolism.  “There’s still a lot of thinking that truck …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying … switchgrass genes related to biomass production, drought tolerance, and other traits that make it a viable …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Genomes to Structure and Function focus area of the JGI’s DNA Synthesis Science Program help advance DOE … recent work builds on North’s focus on bacterial sulfur metabolism and leveraging it for biofuel production. After …
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Mapping the Earth’s Hidden Fungal Kingdom
… estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in perspective, … with the Department of Energy (DOE) Joint Genome Institute (JGI)’s Fungal and Algal Science Program and JGI users have … reveals just how much we still have to discover about Earth's fungal kingdom. The manuscript reviews about 200 …
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Uncovering Novel Genomes from Earth’s Microbiomes
… have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … what they work on. The genomics community can now explore metabolism using KBase’s easy path from genomes or MAGs to …
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Help from Citrus’ Bitter, Hardier Cousin
… Citrus , appeals in other ways. It better tolerates cold, withstands pests, and, especially tantalizing, resists a … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors of the  recent study …
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The Expanding Universe of Methane Metabolisms in Archaea
… archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent … played a key role in determining the composition of the Earth’s atmosphere and regulating the global climate for … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly …
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Peatland microbial community responses to plant functional group and drought are depth‐dependent
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, 24 large-scale … Many fungi have beneficial symbiotic relationships with plants and bacteria; in many instances, fungal physiology is … Dick of The Ohio State University aims to study plant drought resilience in the Sahel, an arid region of West …
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