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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of … Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … computational analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the …
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Partners
… The JGI leverages its existing partnerships and develops others … Energy Research Scientific Computing Center (NERSC) and data infrastructure projects—the DOE Systems Biology … expand data functionality. Close partnerships with other user facilities enable the ability to leverage their …
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Natural Prodcast Episode 4: Nancy Keller
… Aspergillus was pretty good, but, you know, just from a data standpoint, just figuring out introns and dealing with, … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… sites designed to collect long-term open access ecological data to better understand how U.S. ecosystems are changing.  … Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory … your data elsewhere. However, the  NEON Biorepository data portal can host many types of sample-associated data and …
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Natural Prodcast Episode 11: Marnix Medema
… center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade … there is many. I would say, perhaps, half of or more of the users of antiSMASH are not in this field either. So they … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …
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Natural Prodcast Episode 5: Brad Moore
… first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I … before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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Natural Prodcast Episode 2: The Primer, Part 2
… have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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Natural Prodcast Episode 3: The Primer, Part 3
… state of things, and what we’re hoping to accomplish at JGI in this area. If this series of podcast episodes has … probably been since the last decade. We have a lot more data. Obviously, there’s been a lot of sequencing going on, … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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JGI Launches Latest Strategic Plan
… quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year history. In … of the Integrative Genomics Building—the new home of the JGI and KBase in the heart of the Lab’s 200-acre campus—with … our Berkeley Lab colleagues, particularly with the other user facilities including the Advanced Light Source, the …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics … multi-institutional research team that combined field data with a reference switchgrass genome to associate … two JGI Engagement Webinars promoting the JGI fungal data portal MycoCosm and the algal portal PhycoCosm. …
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UC Merced Interns Reflect on Their JGI Summer Projects
… past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … worked on ranged far and wide — from implementing new data visualization tools, to using natural language … but virtual events and technology enabled a fruitful experience for mentors and students alike. Tools like Slack, …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore applications in the life … is one of the largest producers of environmental genomics data and has a strong reputation in the community,” said JGI …
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