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Products
… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … by physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … Combined assembly of related fractions originating from the same sample, annotation ( IMG/M ), binning Depends …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… Biology article highlights how one microalga collected from water on the ice surface handles such fluctuations. P. … nutrient-poor conditions. It lives in a range of habitats — from brine pockets and melt pools, and within the water … in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint Genome …
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Plant Program
… agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton capture atmospheric carbon, helping to regulate Earth's carbon balance, to exploring the …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the … under FP00005685. In addition, M.D. acknowledges funding from a National Defense Science and Engineering Graduate …
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Better Crops With a Pointillist Approach to Plant Genomics
… peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And eventually, their findings could help us grow better crops, with less impact on our planet. …
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JGI@25: Stories from Intern Alumni
… and capabilities to enable great science that will help solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. From field research and wet lab experiments, to …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… Innovative technology from this biomanufacturing collaboration is available for … describe a strategy to recover high value products from human waste. They   genetically modified yeast to … around the world are exploring ways of separating urine from other waste streams and recovering resources that could …
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DAS Tool for Genome Reconstruction from Metagenomes
… and validating an integrated approach to genome recovery from metagenomes. The Science Through the JGI’s Emerging … allowing them to reconstruct more near-complete genomes from soil metagenomes compared to other methods. The Impact … benefit from the ETOP program, as tools such as this can help advance genome-centric analyses. DAS Tool will …
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A Sorghum Pangenome Opens More Doors to Discovery
… Danforth Plant Science Center. Collaborators benefitted from sequencing resources as part of the Community Science … a tool. It shows genetic variation across sorghum varieties from a much broader view than ever before. With this … to show that turning off the shattering gene resulted from single-base changes in DNA, called single nucleotide …
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Microbial Program
… of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve … annotations, and function distribution. These are derived from isolates and single cells. This effort uncovers novel … sequencing of micro-eukaryotes directly isolated from environmental samples.  …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of the … covering the entire kingdom of fungi. “The information from this project may also have a practical relevance with helping to synthesize codon-optimized fungal genes for …
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A novel open-source cultivation system helps establish the first full cycle chemosynthetic symbiosis model system involving the giant ciliate Zoothamnium niveum
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