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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … for the JGI Annual Meeting closes on March 11, 2019. Novel Yellowstone archaeon belongs to Korarchaeota Drs. Luke McKay …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … Policy. It is our mission to support open data and information sharing. We also recognize the need to have a limited … is granted to proposal PIs, Co-PIs, and collaborators of any given proposal. Third parties (often referred to as …
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Yellowstone Lake Nanoarchaeota
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… data, a new JGI tool more accurately facilitates microbial genome discoveries. Unlocking the intricate … assembling over 220 Tb of sequences and obtaining 700 Gb of assemblies. The team skipped the binning process … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … talk about genome mining using the GEM catalog in  this episode of the JGI  Natural Prodcast . Using this massive … clustered the MAGs into 18,000 candidate species groups, 70% of which were novel compared over 500,000 existing …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … Successful applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be … CSP projects. In addition, they must utilize a broad range of the capabilities across at least two of the facilities, …
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Geomicrobiology of sublacustrine thermal vents in Yellowstone Lake: geochemical controls on microbial community structure and function
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