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JGI@25: Using Team Science to Build Communities Around Data
… 1 billion years of evolution in Kingdom Fungi — from phylogenetic relationships to evolution of genomic mechanisms — … plant genomics community. The project’s aim is to generate high-quality genome assemblies and annotations for … or C-fern — came out in the September issue of Nature Plants . C-fern has a genome approximately three times the …
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Bioenergy sorghum nodal root bud development: morphometric, transcriptomic and gene regulatory network analysis
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The F-Box Gene Family Is Expanded in Herbaceous Annual Plants Relative to Woody Perennial Plants  
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Microbial Program
… energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and …
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John Vogel
… pipeline and, in collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an … these resources to understand genome organization and regulation, abiotic stress tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his …
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Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing …
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Igor Grigoriev
… analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program … Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, … atlas of mushroom development reveals conserved genes behind complex multicellularity in fungi. Proc Natl …
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An orphan gene BOOSTER enhances photosynthetic efficiency and plant productivity
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced … to identify variations of essential genes in metabolic networks that were missed using traditional approaches. This …
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Better Crops With a Pointillist Approach to Plant Genomics
… using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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A Plant Root Atlas for Tracking Developmental Trajectories
Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … the largest integration of single-cell datasets in plants and provides a foundation for still larger efforts in … applicable for non-model species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” …
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