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Gene duplication and genetic innovation in cereal genomes
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Natural Prodcast Episode 16: Marcy Balunas
… products is that we don’t know what all the biosynthetic gene clusters look like.  DAN: For sure.  MARCY: We have so … much information about what the Actinomycete biosynthetic gene clusters look like. And we’re just getting to where … finding the molecules so then we can tie them back to the gene clusters right? The more Info we have the more Info we …
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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CreA-mediated repression of gene expression occurs at low monosaccharide levels during fungal plant biomass conversion in a time and substrate dependent manner
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I-Min (Amy) Chen
… she was Director of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key components of Gene Logic’s flagship Genesis data management platforms for gene expression data, one of the most successful data management …
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Natural Prodcast Episode 6: Marc Chevrette
… that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … of many different things in microbiology and biology in general. And her efforts first at Yale and now at University … with JGI to do genome sequencing, so to look for the genes that are involved in putting antibiotics together, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … can serve as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… interaction up close, using RNA sequencing to understand gene expression: one of the first cross-kingdom … can serve as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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JGI Portals
… host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database … available sequenced algal genomes and genome annotations generated by the JGI and by others. The web portal allows … Plant Comparative Genomics portal. Families of related genes representing the modern descendants of ancestral genes …
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Microbiome Data Science Team
… include exploration of the global diversity of alternative genetic codes (Science 2014), unearthing hundreds of … Science 2017, Nature Microbiology 2018), discovery of new genes with important biotechnological applications (e.g., … Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri …
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Natural Prodcast Episode 9: Roger Linington
America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … my perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and all kinds of other crazy things. …
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