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Plant-Microbial Interactions Group
… system. We seek to expand beyond this model system by identifying phages and characterizing this multipartite phenomenon … expression patterns in root cross-sections. … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z … 10.1073/pnas.1907500116 10.1016/j.celrep.2019.04.054 10.1371/journal.pbio.2002860 … Postdocs: Margot …
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Katherine Louie
… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI scientists … to assess metabolite turnover, DNA-SIP for helping identify active micro-organisms within complex communities, and …
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Kjiersten Fagnan
Storage and Analysis, 2018, pp. 717-730, doi: 10.1109/SC.2018.00060. Wood-Charlson, E.M., Anubhav, Auberry, D. … Microbiol 18, 313–314 (2020). https://doi.org/10.1038/s41579-020-0377-0 S. Pau and J.B. Bell and A.S. Almgren and K.M. …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He … from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available …
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FICUS Overview
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Tanja Woyke Elected to American Academy of Microbiology
Woyke has led JGI’s Microbial Genomics Program since 2009 and heads the Single Cells group. She has also served as … the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this group expanded … Podar of Oak Ridge National Laboratory, who spoke at the 2019 New Lineages of Life (NeLLi) Meeting organized by the …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements … any kind of biomass breakdown. They’ve spent millions of years evolving tactics against potential threats. “Because … team leveraged transcriptomics and other assays to identify and test carbohydrate-active enzymes. They found many …
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Workforce Development & Education Outreach
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Game On: High School Students Drive Everglades Metagenomics Study
… of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International Certificate of Education … Education (E4) community-building workshop at the  2019 Association for Environmental Studies and Sciences (AESS) …
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Introducing New Members of the JGI User Executive Committee
… been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. …
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JGI User Executive Committee Expands
… research and don’t award at least 70 research doctorates a year. Coinciding with the election results, Roland … been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Members serve …
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Tanja Woyke
… into the Microbial Genomics Program Lead position in 2009 and assumed the Deputy Director of User Program position … Member for ISME J (Senior Editor 2016-2021), Peer J (2015-2019), Scientific Data (2017-2019). Reviewer for major journals and funding agencies, …
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