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… recently selected as the 2025 recipient of the Microbiome Data Prize by the American Society for Microbiology (ASM). … the virus and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished … practices, development of standards and processes for data quality and sharing, and data workflows and management best …

… flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC … hardware and worked closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was … of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is …

… have been sequenced from curated DSMZ isolates, for which quality DNA has been provided by the team. These strains … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly … gene loss shape the BGC repertoire in most genomes. The BGC data will also soon be contained within the JGI’s Secondary …

… 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly … Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal Science category … guidelines and best practices for defining virus data quality. Reported in Nature Biotechnology, the work brought …

… Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities … CSP New Investigator Submission …

… available hours. Other DOE Quarterly Metrics Q1 – Report on new computational developments for improving microbial, … capabilities to analyze complex genomic or metagenomic datasets. [Download PDF] Q3 – Report on new computational …

… a great opportunity to study and learn something totally new during my Ph.D. What is/has been one of your favorite … I got to work with an enormous set of fungal genomics data. For me, it was an opportunity to adapt my existing … a STEM career, particularly one that incorporates big data. A large part of my project this summer was utilizing a …