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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The … of several communities in New Mexico via leakage from a local dry-cleaner. Researchers  identified two … of the groundwater were nearly cleared of contamination. By 2020, the water was at contamination levels that are below …
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University of California, Merced Internship Program
… at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 80 UC Merced students have contributed to the research of numerous JGI scientists. Interns say …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … The work builds upon a pilot project to sequence antimicrobial-producing strains. Established by Handelsman, Tiny … algal viruses.  The approved proposals started October 1, 2020 and the full list is  available here . They are …
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The environment drives microbial trait variability in aquatic habitats
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … are genes out there that affect this phenotype.’”  Results from A “Massive Amount” of Sequencing  Seed dispersal is … accessions, and to confirm phenotypes, which validate traits.”  “The number of lines sequenced is not trivial, and …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Nigel Mouncey
… biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and … DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … Discovery. mBio. 12:e03432-20 Wood-Charlson EM et al. 2020. The National Microbiome Data Collaborative: enabling …
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Building Sphagnum Genomic Resources
The Science Enabled by the JGI’s Community Science Program (CSP), researchers are developing a number of resources to … can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the … .” Understanding the nature and genetic basis of functional traits in sphagnum growth and decomposition is critical to …
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JGI announces 2024 Functional Genomics awardees
… proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional Genomics call , we look for projects that …
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Unique genomic traits for cold adaptation in Naganishia vishniacii, a polyextremophile yeast isolated from Antarctica
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Natural Prodcast Episode 19: Bill Fenical
… real legends of natural products, Professor Bill Fenical from Scripps Institution of Oceanography in San Diego. Bill … powerful people. These were people that really controlled microbial drug discovery. And a guy like me, with no … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology
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