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Bacterial Diversity in the Cecum of the World’s Largest Living Rodent (Hydrochoerus hydrochaeris)
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… a “river of grass” that stretches some 580,000 square miles across southern Florida, they encompass a wide range of … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley …
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Who We Are
… from plants, fungi, algae, non-medical microbes, microbial communities, and other relevant organisms. We … access to large-scale datasets and analysis tools for genomes, metagenomes, and metabolomics through its data portals. … went on to advance basic science by sequencing scores of microbial species as well as several model organisms and …
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Jeremy Schmutz
… eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz has directed … of community driven science for JGI Plant Flagship Genomes and DOE relevant cellulosic feedstocks. He provides … Institute and the collaborative projects funded through the CSP program. In addition to continuing to develop strategies …
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Mapping the Earth’s Hidden Fungal Kingdom
… of tackling this enormous challenge, assembling one of the world's most comprehensive collections of fungal genomes. A sweeping analysis published in Nature Reviews … publications linking evolutionary history and innovations across different classes of fungi. “The enormous diversity …
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Microbial responses to long-term warming differ across soil microenvironments
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Webinar: MycoCosm Tutorial
… A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … genomes and those external genomes that enable JGI CSP projects – please first contact us … https://mycocosm.jgi.doe.gov/conserved-clusters/run/run-2020 you can indicate either your progress if you’re already …
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Mining metatranscriptomes reveals a vast world of viroid-like circular RNAs
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… because they often need unique conditions and a specific microbial host to replicate. Sequencing genetic material … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … Camargo developed a new pipeline for identifying viruses across many thousands of genomes and metagenomes, called …
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Major changes in microbial diversity and community composition across gut sections of a juvenile Panchlora cockroach
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, the cotton … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane Grimwood and Jeremy …
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Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments
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