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Natural Prodcast Episode 21: Elizabeth Parkinson
… natural product biosynthetic pathways, which led her to a successfully funded JGI CSP project. And we also got to talk … in is actually seeing whether we could go into the genomes and predict what the natural product might actually … Well, obviously, I teach, but the other thing that's been a big thing for me is thinking about mental health for …
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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … to us for a decade? We believe this basic research has to occur in order to drive the research. Oftentimes, these …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into … sequence data, was absolutely critical for the success of this effort and so was the acknowledgement of their … detected.” Developing Approaches for Reconciling “Real” Big Data For the team, the computational work that led to …
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Phylogenetic and metagenomic analysis of Verrucomicrobia in former  agricultural grassland soil
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … around the world. These tools give researchers a way to access much more information about fungi in these … mycorrhizal symbionts shuttle water and nutrients to trees; plant pathogens colonize living plants to feed on them.  …
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10 From JGI on the 2019 Highly Cited Researchers List
Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has … Category Fungal and Algal Program head Igor Grigoriev , Plant & Animal Science category Plant Program Library … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more …
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The Reference Genome of the Halophytic Plant Eutrema salsugineum
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Phytozome: a comparative platform for green plant genomics
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Reference genome sequence of the model plant Setaria
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Genomic Analysis of “Elusimicrobium minutum,” the First Cultivated Representative of the Phylum “Elusimicrobia” (Formerly Termite Group 1)▿ †
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Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern
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Igor Grigoriev
Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the … 762-765. Gobler CJ et al. Niche of harmful alga  Aureococcus anophagefferens revealed through ecogenomics.  Proc …
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