Global overview and major challenges of host prediction methods for uncultivated phages
Results
FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus
Computational Strategies for Scalable Genomics Analysis
Optimizing de novo genome assembly from PCR-amplified metagenomes
MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes.
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Tackling soil diversity with the assembly of large, complex metagenomes
Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences
Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
IMG/M: a data management and analysis system for metagenomes
