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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … and Virginia Polytechnic Institute State University, was released to the public in a highly-cited 2006 publication in …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … gallons of fuel per acre to compete with gasoline. Yet.  In 2010, soybean became the first legume species with a … that’s a good niche market for soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately …
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A Practical Approach to Using the Genomic Standards Consortium MIxS Reporting Standard for Comparative Genomics and Metagenomics
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Metagenomic Methods for Addressing NASA's Planetary Protection Policy Requirements on Future Missions: A Workshop Report
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A Step Toward Controlling Soybean Rust
… produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much … plant genome , and JGI  published its genome sequence in 2010.       … The U.S. Department of Energy Joint Genome …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how viruses impact the release of greenhouse gases from Arctic permafrost. But to see …
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Rex Malmstrom
… is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: … for maintenance to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward …
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Nigel Mouncey
… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a … DOE National Laboratories, the Community Science Program (CSP), and external collaborations. The Director ensures the … J Ind Microbiol Biotechnol. 46:273-279 Krajewski V et al. 2010. Metabolic engineering of Gluconobacter oxydans for …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since … program supports cutting-edge research in synthetic biology by synthesizing genes, pathways, and whole chromosomes for …
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