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Viral Genomics Group
… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving … of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. … 4 , 1895–1906 Roux, S. et al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech …
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Polynucleobacter meluiroseus sp. nov., a bacterium isolated from a lake located in the mountains of the Mediterranean island of Corsica
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … bulk of which belong to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this … J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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Analysis of the Neurotoxin Complex Genes in Clostridium botulinum A1-A4 and B1 Strains: BoNT/A3, /Ba4 and /B1 Clusters Are Located within Plasmids
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Integrating Experimentation with Data
… data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic panel discussions, informative poster sessions, thought-provoking … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … produced by groups of genes known as biosynthetic gene clusters (BGCs.) As reported in the recent Database issue of … of the closest comparable database. … Dan Udwary talks about the Secondary Metabolism Collaboratory  … Browse BGCs …
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Enlarging Windows into Understanding Gene Functions
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … “It’s an innovative way to rapidly capture the binding location for most transcription factors in a species,” … as tough as it has been 10 years ago,” he said. “We thought about reconstructing gene regulatory networks, understanding …
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JGI@25: Stories from Intern Alumni
… and wet lab experiments, to computational modeling and virtual projects, hear intern alumni Candace Cole, …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … switchgrass production areas across the U.S., guiding the location of the common gardens. “Gardeners and farmers fully …
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Microbiome Data Science Team
… into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. … in tackling grand challenges in Biology, with a special focus on microbiome research.  These efforts include … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a …
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VEGA Symposium
… together a “Viral EcoGenomics” community to foster discussion on how to best capture and characterize uncultivated viruses, understand the role of viruses in natural ecosystems, … applications.  Thank you to all of our in-person and virtual attendees! Click here for the event photos. Keynote …
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Game On: High School Students Drive Everglades Metagenomics Study
Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the … the next generation of scientists. She shares her thoughts about the experience below. In the summer of 2018, Jonathan … the Loxahatchee National Wildlife Preserve. They chose this location because much is unknown about the diversity of …
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