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JGI Announces 2026 New Investigator Portfolio
… a list of researchers whose proposals were accepted for 2026. With the JGI's resources, these researchers will … the next deadline for proposal submission is Sept. 8, 2026, for inclusion in the October 2026 review. You can also find more information about the …
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Silver age of GOLD introduces new features
… in the journal  Nucleic Acids Research in November 2022.  One of GOLD’s strengths has been implementing metadata … of Science of the U.S. Department of Energy operated [DE-AC02-05CH11231]; National Energy Research Scientific Computing …
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When “The Blob” Made It Hotter Under the Water
… which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water … events such as The Blob is difficult, but critical. By 2016, the microbial populations had begun to recover from the … of the U.S. Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell …
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Simon Roux
… ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established … Neri et al., 2023. Expansion of the global RNA virome reveals diverse …
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Introducing New Members of the JGI User Executive Committee
… terms. The JGI solicited UEC nominations in late 2022 and the election period concluded on Jan. 6, 2023. With the election, the following UEC members stepped …
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New Research Sheds Light on Diversity in the Deep Sea
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User Support Analysis Group
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Jeremy Schmutz
… co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome … Healey, A.L., Garsmeur, O., Lovell, J.T. et al.  2024.The complex polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … v12 was first deployed (as the foundation for Phytozome v10) back in 2014.  Several components of that codebase are … grab genomes based on which version of Phytozome (e.g., 9, 10, 11, 12) they were first released in.  Are any genomes …
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Katherine Louie
… analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … untargeted analysis pipelines.  Beyond profiling over 10k samples/year, Dr. Louie and her team work with other JGI … natural products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, …
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Introducing New Members of the JGI User Executive Committee
… and can serve no more than two consecutive terms. In late 2021, the JGI launched a solicitation for nominations for … stages. The election period concluded on December 23, 2021. …
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