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… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … than previously suspected. “That would cause significant consequences on the entire food web, and therefore ecosystem … After isolating the algal communities on filters, they sequenced DNA ‘marker’ gene sequences to identify the …

… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … M. importuna CCBAS932 from the forests of France, were sequenced and annotated by a collaborative team. The genome sequences and annotations are available on JGI’s fungal …

… single drop of water could outnumber a small city’s population, the number of viruses in the same drop—the vast majority … genomes of uncultivated giant viruses from environmental sequences across the globe, then using these sequences to make inferences about the biogeographic …

… team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c … us to assess CRAGE’s impact, including how this application could scale,” says Mouncey. The JGI team has already … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, “Once …

Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … So, to be able to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from their soil samples. This …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project … samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed the soil samples, the JGI offered 7 … and Proteobacteria to be the most common phyla of bacteria sequenced from the metagenomic soil samples from the four …

Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …

Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 …

On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to … the researchers will receive a FedEx package with the sequenced, quality controlled population representing the …

… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … of Science user facility located at Lawrence Berkeley National Laboratory, have collaborated with global researchers … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …

Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … A collaborative team led by Joey Spatafora at Oregon State University, Jason Stajich at the University of … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …