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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The … grass that adroitly handles droughts, floods and poor soils. This is the first paper that describes sorghum’s … conditions, and then collected root, leaf and rhizosphere (soil surrounding the root) samples from the plants at …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… Institute and the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Advanced Photon Source (APS) at Argonne National Laboratory when … FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. … bacteria  Pseudomonas  and Ralstonia with enzymes that make phosphate bioavailable for plants. When these engineered …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials including sunlight, … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… P. psychrophila genes drive resilience when salinity fluctuates. The … ice in the Arctic has decreased by more than 30% in terms of quantity and thickness. Replacing older, thicker ice with … in the Arctic, and how different types of microbes form communities. As temperatures fluctuate, salt levels change …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … time, researchers have discovered and characterized a novel phylum-level lineage of archaea with at least two major … comprise 20-50 percent of the iron-oxide microbial mat communities in the 60-80°C temperature range. The discovery …
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Transcription Factor Amr1 Induces Melanin Biosynthesis and Suppresses Virulence in Alternaria brassicicola
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet … carbon cycle. Archaea are key players in this deep biosphere. They have adapted to acquire carbon efficiently and … However, no microbe works alone. Archaea, bacteria, and viruses all operate in concert to form the foundation of …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … Algae are important organisms. They play key roles in global carbon cycling, are sources of natural products, and …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) Division, and … Science is the largest supporter of basic research in the physical sciences in the United States, and is working to …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK Reddy … Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth … Theo Loreaux and mentors Simon Roux and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of …
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