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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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MISIP: a data standard for the reuse and reproducibility of any stable isotope probing-derived nucleic acid sequence and experiment
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A novel regulator of the fungal phosphate starvation response revealed by transcriptional profiling and DNA affinity purification sequencing.
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Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate embryo and root development
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Draft genome sequence of Dolosicoccus paucivorans DSM 15742T isolated from a patient's blood in Cleveland, Ohio.
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Draft genome sequence of Muricoccus roseus DSM 14916T, isolated from a children’s care center in Finland
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Diversity of Sordariales Fungi: Identification of Seven New Species of Naviculisporaceae Through Morphological Analyses and Genome Sequencing
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on … candidate bioenergy feedstock crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a … on two types of naturally occurring switchgrass, those with 4 copies of the genome (4X) and those with eight copies …
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A Step Toward Controlling Soybean Rust
… 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core … public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence data from over 1.3 million publicly available …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI … linked data technologies. The NMDC seeks to connect and engage the microbiome community to unlock new possibilities in …
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Community Science Program
… The Large Scale call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter … proposal list, along with a recommendation from JGI management, is then forwarded to DOE for final approval. Following DOE approval, project managers and JGI scientific and technical staff negotiate …
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