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Root cap cell corpse clearance limits microbial colonization in Arabidopsis thaliana
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Single-cell genomics reveals complex microbial and viral associations in ciliates and testate amoebae
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Multi-omics reveals nitrogen dynamics associated with soil microbial blooms during snowmelt
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …
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User Support
… specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? … historically for making sustainable products in industry.” From Cell to “Soup” The work started with yeast strains … particular pathways. In this case, towards BDO and away from ethanol, an undesired product of the yeast’s native …
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Four Researchers Join JGI User Executive Committee
… regular participants of the JGI annual user meeting and New Lineages of Life symposia. Bik is a recipient of the … worked closely with both the Fungal & Algal Program and the Microbial Program over the past decade in gene regulatory … Kristen DeAngelis will serve as the Past Chair.  Aside from the duties described above, the UEC also contributes to …
Learn more
Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? … historically for making sustainable products in industry.” From Cell to “Soup” The work started with yeast strains … particular pathways. In this case, towards BDO and away from ethanol, an undesired product of the yeast’s native …
Learn more
Ian Blaby
… Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … Wales, Cardiff, Genetics Ph.D. – University of Cambridge., Microbial molecular biology Post-doctoral positions  – … profiling of a synchronized diurnal transcriptome from Chlamydomonas reinhardtii reveals continuous cell and …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… with excitement and determination as they came onsite. From data carpentry to science communications, their … Andrew Lin and mentor Vy Duong, Understanding Key Genes in Photosynthesis Ravikiran Madichetty and mentors TBK Reddy and … with Dr. Tomas Tyml and Dr. Frederik Schulz with the New Lineages of Life Group at JGI. And we’ve been working on …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… have lived in symbiosis with plant roots. Plants provide photosynthesized carbon, while fungi deliver water and … as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship …
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Matt Blow
… R&D for production and user science. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge … Bowers et al. 2024. scMicrobe PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. … Engineered Root Bacteria Release Plant-Available Phosphate from Phytate. Appl Environ Microbiol 85(18):e01210-19 Price …
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