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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Analysis of twelve genomes of the bacterium Kerstersia gyiorum from brown-throated sloths (Bradypus variegatus), the first from a non-human host.
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Party in the Rhizosphere
… There’s a party in the soil, and microbes are the VIPs. They’re feasting on the … that plants secrete through their roots, creating a lively zone called the rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … in particular, as a model system for venom-microbe interactions. Cone snail venom has a number of applications, … today. I didn’t know anything about Principal Component Analysis (PCAs) when I first started, and overall found …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … bacterial clades shared between honey bee and bumblebee gut microbiomes. Researchers found that pollen’s pectin and … that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to … thousands of researchers in genome projects and organized numerous genomics workshops. …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … date, involving more than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Building Sphagnum Genomic Resources
… Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … estimate that they hold about 25 percent of the world’s soil carbon. In high latitudes, sphagnum can also act as a … Environments) project, assessing how northern peatland ecosystems respond to increases in temperature and elevated …
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