Search

Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …

Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … conventional food crops. For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be … diseases are well known to be partially due to the DNA sequence that makes up an individual’s genome. The genes of …

By studying the structure and function of a cyanobacterial protein, researchers have new … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of … the cell, Grosjean used the JGI-developed  guideRNA and Sequence Extraction Tool (gRNA-SeqRET) to produce knock-out …

… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 interns, … briefly shared their experiences below. Name: Noelle Anderson Class Year: At the time of the internship, 4th year PhD …

Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals … collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned …

… private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a senior research …

… deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these …

… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …

Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited … includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, defined in the Methodology section … Nature Genetics, the work is part of a long-term project to sequence, annotate and analyze the genomes of more than 300 …

Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …

As SIP experiments shed more light on microbial communities than ever before — especially with … work to create FAIR datasets to maximize returns on these advances. Over the last two decades, Stable Isotope … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required …

Jan. 7: New Capabilities to Study Secondary Metabolism   Although there are still a large number … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …