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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple … to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to leverage …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change … This work was performed under the auspices of the Scientific Committee on Oceanographic …
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JGI Announces 2023 Community Science Program Awardees
… Congratulations to the proposers of the 19 proposals selected for the 2023 Community Science Program call of the U.S. … about our proposals, including how to apply, here on our website. The approved proposals start October 1, 2022. See …
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The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art … genomics research from reseachers who translate genomic information into biological function. Through our CSP …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. … regulation is critical to ensuring genes vital for growth and survival across various environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of … model, researchers also generated the first transcriptomic dataset of sexual reproduction in early fungi and discovered genes that are critical for this process. The Impact In the absence of the … This research was supported by the National Science Foundation and …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was published in the journal … from looking at single organisms to applying a broader ecosystem perspective, involving more multidisciplinary teams. …
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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time … analyses at their desks. As part of the DOE JGI’s efforts to promote diversity and inclusion in the sciences, …
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive …
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Styling for Safety: PPE, It’s the JGI Way
… PPE or Personal Protective Equipment is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE … The U.S. Department of Energy Joint Genome Institute, a DOE Office of … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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