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JGI Early Career Researchers Featured in mSystems Special Issue
… genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many ecological … and a specific microbial host to replicate. Sequencing genetic material directly from samples sidesteps these … key aspect of viruses in the environment — their sheer genetic diversity. As pioneers of this field, the JGI has …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… projects were also intensively discussed. The Berkeley Synchrotron Infrared Structural Biology (BSISB) Program for the … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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JGI Announces 2023 Community Science Program Awardees
This year’s annual CSP call had five areas of emphasis: genes to function, plant and algal functional genomics, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… it’s difficult to link the connections to them from the genetic elements that scientists have found, e.g. plasmids … using a method named Multiple Displacement Amplification to generate enough DNA to put on a sequencer. As previously …
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Viruses Reprogram Cells into Different Virocells
For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. …
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Effects of Polar Light Cycle on Microbial Food Web
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Mindfully Moving JGI
… labs in one long building at Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing … unneeded Lab tagged equipment, recyclables, and general waste that would actually go to the landfill. … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Toward More Efficient Artificial Photosynthesis
… a platform that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The MPI team ultimately aims to develop an … lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …
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Eelgrass Proves to Be Much Younger Than We Thought
… a timeline like this, researchers would normally craft a genetic clock based on its divergence with a  different … researchers to use the genome assembly to calibrate their genetic clock.  Various researchers around the globe were … in various locations.  One group investigated changes in protein sequences, while others analyzed single point …
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Building Sphagnum Genomic Resources
… soil carbon. In high latitudes, sphagnum can also act as a protective layer insulating permafrost from the warming … and evolutionary genomics .” Understanding the nature and genetic basis of functional traits in sphagnum growth and … species encode a sulfate reduction pathway, but also have genes for sulfide oxidation. The findings lead them to …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… understanding which microbes are present in a sample, to generate data about which organisms are active, and which … process to carry out the onerous SIP sample processing. Generating these datasets opens up the possibility of new … They found that although 20 years of SIP experiments have generated plenty of insights, many studies don’t report the …
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