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Scaling Up Existing Skill Sets
… in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … JGI internship has given me a great experience working intermediately between academia and industry, which is … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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2022 Progress Report
… the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative genome science user …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile genetic … that happen between tiny organisms (microbes) located in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. … for making high-value bioproducts. As a step toward the long-term goal, researchers are now able to automate and …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute … has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …
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Ben Bowen
State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & … (2015). Exometabolite niche partitioning among sympatric soil bacteria. Nature communications, 6(1), 8289. Yao, Y., … Google Scholar. … Education … Awards and Honors … Selected Publications …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … Scientists found both a gene likely important for sex determination and a shared genetic architecture with Y … willows through the  Community Science Program , using long-read sequencing to assemble the repetitive areas of the …
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Succession in the petroleum reservoir microbiome through an oil field production lifecycle
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Deep‐sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
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Making a Lichen Together
For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their … of two (or more) participants. One is a fungus (usually belonging to the ascomycetes, one of the two main branches of … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens …
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Fungal Friends or Foes in Plant Roots
Their analysis identified fungal gene families that help determine if these fungi act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can … boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped …
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