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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never … write reports, and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences … (cDNA), reducing the amount of time it takes to produce a dataset from months to days and halving the total reagent … to further their research, watch the JGI Engagement Webinars series. Letters of Intent for the next annual …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that showcase our …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics … infrastructure – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the …
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Virus-Microbe Interactions of Mud Island Mangroves
…   Later this year, Ian Rambo, a graduate student in Brett … work was overseen by Susannah Tringe, head of the Microbial Systems group. He also worked with Simon Roux and David … the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable … is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken by JGI’s own Jon … by the JGI (isolates here , here and here ), and the data has been used to better understand arsenic mobility and …
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SIPs with Standards
… Stable Isotope Probing (SIP) is a powerful technique for studying microbial communities. These experiments can … more researchers. Ultimately, the goal is to generate SIP data that can be useful to multiple teams and analyses. This …
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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what … more of these viruses than ever before, in all kinds of ecosystems. However, matching these viral genetic sequences to … used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to … tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how …
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Better Living Through Bioenergy
… Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … standard conditions. As described in a recent issue of mSystems , scientists found that adding salt to the growth … offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage …
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