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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research … in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for the first … Blurring the Line Between Plasmids and Phages …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon … molecular protocols.  Finally, his team utilizes new technologies, e.g. acoustic liquid transfer and …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our … and that’s going really well. And having the sequence data available for us to enable that research will have a … Glycine max on Phytozome …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Cultivating Symbiotic Antarctic Microbes
… Nanohaloarchaeota cultures reveal they are symbionts and not free-living organisms. The … about how microbes have adapted to thrive in polar ecosystems. The work by Cavicchioli’s team sheds light on the … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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MGM Workshop at Fisabio Summer School
… June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is … fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI researchers Lee Call,  … published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage … This work conducted by the U.S. Department of Energy Joint Genome Institute …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main ingredients to … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes … their funding sources: Office of Biological and Environmental Research of the U.S. Department of Energy grant …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… More than 20 UC Merced students have contributed to the … the difficult early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont …
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Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy
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