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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program … alumni, and other staff gathered at the Integrative Genomics Building, the JGI’s home at Berkeley Lab, as … development. We have a number of initiatives across several different campuses with this being our largest and most …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … data this work leverages. These experiments focused on two species at once: the model legume species  Medicago … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address climate … this work leverages.   These experiments focused on two species at once: the model legume species  Medicago … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working … Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement. Nature …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Expanding Virophage Diversity
… are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which … an early version of the paper at the 2018 Viral EcoGenomics & Applications (VEGA) Symposium. The work also used …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI … beyond the tried-and-true method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell … sequence reads to link mobile elements such as plasmids to microbial host cells. In a separate article, research …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have … microscopic water mold, genetically related to such aquatic species as diatoms and kelp. Dubbed Phytopthora ramorum … decode the complex Phytophthora ramorum genome. The JGI generated the organism’s DNA code in tandem with a …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 … discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … advancements that facilitate the shift from uncovering microbial novelties to deciphering metabolic and functional …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. … and renovation of Building 310, adding the crowning piece of the entire 80,000 square foot, three-building … co-localization of JGI and KBase at the Integrative Genomics Building (IGB). Said Michael Brandt of Ray, “You …
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint … Program, and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for … ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too deep in the sea to get …
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