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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… changes in cyclic di-GMP via live cell imaging. Summary From digestive tracts to plant surfaces and soil, bacteria … at the University of California, Berkeley and the Joint Genome Institute, a DOE Office of Science User Facility, … BRET biosensors have high signal intensity, but produce small signal changes in response to the molecule of …
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A Community Resource for Secondary Metabolite Researchers
… public database for the research community. With more than 13 million BGCs in the catalog at the time of publication, it … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as IMG-ABC. That portal …
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Genome evolution in the allotetraploid frog Xenopus laevis
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The Genome of the Western Clawed Frog Xenopus tropicalis
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Effects of Polar Light Cycle on Microbial Food Web
… other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when sunlight becomes scant, Ace … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … found that the green sulfur bacteria population spiked to 83%, only to dramatically fall to 1% in early spring and …
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High quality draft genome sequences of Pseudomonas fulva DSM 17717T, Pseudomonas parafulva DSM 17004T and Pseudomonas cremoricolorata DSM 17059T type strains
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Building on Experience, With a Twist?
… The first time I did this internship in the summer of 2020, it was a time where the world literally stopped. …
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Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
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Water aging and the quality of organic carbon sources drive niche partitioning of the active bathypelagic prokaryotic microbiome
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple … Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), and the Energy Sciences Network … that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  Kjiersten …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted several UC Merced students this past … with excitement and determination as they came onsite. From data carpentry to science communications, their … & Evolution of Self-Catalytic Introns across Earth’s Microbiomes Sonia Vargas and mentors Tomas Tyml and Frederik …
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Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T)
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