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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and reproducible experimentation of …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… 25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and … before. In 2006, the JGI produced 33 billion base pairs of sequence; by 2023, that number was almost 717 trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human … Joint Genome Institute after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the Operations Deputy for LBNL’s Biological Systems & Engineering Division. Prior …
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Viruses Reprogram Cells into Different Virocells
… it no longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of Michigan studying how virus infections cause significant … Researchers have the opportunity to combine the power of genomics and molecular characterization offered at multiple …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah … Kaze was part of the  2018 cohort of the JGI-UC Merced Genomics Internship Program, and is part of  Mark Sistrom’s lab …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the entirety of … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … of members. Each of the researchers had particular reasons for wanting to serve on the UEC. Hatzenpichler, who studies … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been an …
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Access to Rock Star Scientists
… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, … their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI … have done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … microbial mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, … relied on a combination of phylogenomic analyses, transcriptomics for microbial genomic activity (gene expression), and …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… On September 1, JGI held a JGI Engagement: Pro Tips for Successful Community Science Program (CSP) Applications … and relevance to the DOE’s mission.  Have someone proofread your proposal to make sure the goals, experimental … multiple ways to can mix and match synthesis, metabolomics, sequencing. The only requirements are that you stay …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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