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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome Analysis group. In this role he supervises the Genome Assembly, QA/QC, and User Support Analysis teams. … on computational and experimental approaches to study genome regulation in human and other vertebrate genomes. …
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Sequence‐Based Introgression Mapping Identifies Candidate White Mold Tolerance Genes in Common Bean
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Multi-omics profiling of the cold tolerant Monoraphidium minutum 26B-AM in response to abiotic stress
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Membrane lipid and expression responses of Saccharolobus islandicus REY15A to acid and cold stress
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Simon Roux
… in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development … tools to identify virus sequences, the design of new experimental approaches to link viruses to their … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …
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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis methods are bringing this mobilome into light, and opening up new options for engineering these microbes in the future. …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing an unusually small genome
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Tracking the Origins of Methane-Producing Microbes
… Biohub, and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user … and Verstraetearchaeota lineages. The archaeal genome was detected in samples collected by Stephen Quake’s … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …
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How Filamentous Fungi Sense Food
… researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … metabolized in filamentous fungi. The work also suggests a new approach to gene annotation, which then can be explored … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… partnering with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (Berkeley Lab), to help drive discoveries that will render new economic advantages for farmers concerned with improving … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Gut Fungi: Unexpected Source of Novel Chemicals
… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … can whip up dozens of complex natural products, including new ones. The Impact In the past, natural products have been … biofuels. This work shows that anaerobic fungi might be a new source of novel compounds to help bolster the …
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