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Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient
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Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … capabilities, large-scale data, and professional expertise to support the global research community in studies of …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory (Berkeley Lab) … One Health Ruhr (OHR), and the DOE Joint Genome Institute (JGI), Molecular Biophysics and Integrated Bioimaging (MBIB) … the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander Probst, …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects … a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … protocol for higher efficiency in Issatchenkia orientalis using electroportation and heat shock methods Asees Kaur …
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Frederik Schulz
… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he … Grigoriev is the Fungal & Algal Science Program Head at the JGI. Click to learn more about the program's areas of focus, …
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MGM Workshop at Fisabio Summer School 2026
… 4 of the Fisabio Summer School.  The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning and sharing …
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