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Methane Makers in Yosemite’s Lakes
… and met local wildlife (a marmot!) as they’ve sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. …
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Learning to Look
Machine learning approach significantly expands inovirus … a computer could use to conduct a similar type of search in microbial and metagenomic databases. In this case, the … algorithm, the search tool combed through more than 70,000 microbial and metagenome datasets, ultimately identifying …
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The Busy World of Deep Sea Eruptions
… underwater volcanoes and hydrothermal vents — where lively microbial communities thrive, and even support entire … St. John, Gilberto Flores, and Peter Girguis about sampling these communities, and understanding how they’ve adapted to this extreme environment.   …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal is …
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Webinar: Introducing the BioSANS capability
The BioSANS instrument is at the Center for Structural Molecular Biology … the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain access to the Biological Small-Angle Neutron Scattering …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published in a scientific journal is the ultimate achievement. To get …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced students with seven JGI … internship opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer …
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who … organisms may evolve.  Determining the genetic codes of plants is often challenging because in many plants …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … this may be the first publicly available, river-focused microbial resource that provides information at multiple …
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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy …
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