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Building Sphagnum Genomic Resources
… can also act as a protective layer insulating permafrost from the warming regional temperatures. For this reason, the … prevent methane production by routing the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of Konstanz and the University of …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… soil carbon. The process to harvest energy-generating peat from these boggy wetlands produces an estimated 5% of annual … National Laboratory, and the HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, then …
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Filling in the Plant Tree of Life
… and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project …
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IMG/VR
… of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to …
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A Community Resource for Secondary Metabolite Researchers
… it is the largest repository of BGC sequence data from over 1.3 million publicly available bacterial and … metabolites are useful in a variety of fields including biotechnology, medicine and agriculture. This comprehensive … gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome data from the JGI. With multiple threads of evidence showing that … The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm …
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Tracking the Origins of Methane-Producing Microbes
… user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) … JGI on a proposal using this approach through the Emerging Technologies Opportunity Program (ETOP). Following that …
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The More the Merrier: Making the Case for Plant Pan-genomes
… base state, they are diploids with two genome copies, one from each parent. Having three or more genome copies from additional parents or duplication, also known as … Aberystwyth University (UK); HudsonAlpha Institute for Biotechnology; University of Massachusetts Amherst; and, Tomsk …
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The Soil Blooms Green
Every fall, a mysterious green growth appears on top of farmers’ fields: a microbial community that might be quietly …
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Creating an Energy Market for Miscanthus
Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
… final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, …
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Microbial Genomics & Metagenomics (MGM) Workshop
… data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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