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Proposal of Patescibacterium danicum gen. Nov., sp. nov. in the ubiquitous ultrasmall bacterial phylum Patescibacteriota phyl. Nov
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Codon bias, nucleotide selection, and genome size predict in situ bacterial growth rate and transcription in rewetted soil
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC … and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured … so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more meetings and …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations Deputy has come to a close as … as a typical monthly JGI All-Hands Meeting, after a couple of perfunctory items, the agenda went off the rails – …
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Mapping Heat Resistance in Yeasts
… annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … phenotype using a strategy called reciprocal hemizygosity analysis via sequencing (RH-Seq). Strains of S. cerevisiae … then used a series of random insertions of a foreign DNA sequence to generate a huge pool of mutants, each containing …
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A Step Toward Controlling Soybean Rust
… The United States  is the world’s leading soybean producer , and … causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce … JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       …
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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing
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Draft Genome Sequence of the Basidiomycete White-Rot Fungus Phlebia centrifuga
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Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing
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A mosaic monoploid reference sequence for the highly complex genome of sugarcane
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