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High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5T)
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… event will bring together researchers across major ecosystems and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science from largely … is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for precise manipulation and …
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JGI Hosts GPU Hackathon in May
… sure our computational workload can leverage future HPC systems – our data and compute challenges aren’t getting any …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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Training the Next Generation of Talent
… as a first-year graduate student in the Quantitative Systems Biology (QSB) Group under the School of Natural …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… Using a combination of genomic, quantitative genetic, landscape, and niche modeling approaches, we contrasted the … like switchgrass respond to pronounced climate shifts. (C4 plants use a more efficient form of photosynthesis that …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …
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Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15T)
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Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions
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Uncovering Novel Genomes from Earth’s Microbiomes
… Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the … are now available in a  public Narrative , which provides shareable, reproducible workflows. “Metabolic modeling is a … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… capable of knocking down human RNA the way that CRISPR-Cas9 systems snip DNA. This could eventually lead to applications …
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Computationally Classifying Fungal Lifestyles
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