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A User-Centered Approach to Accessing JGI Data
… requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Webinar: SIP technologies at EMSL and JGI
… Mass Spectrometry, NanoSIMS, and other techniques. Q&A from the Webinar: 1. Q(uestion): How much DNA is required … samples are in hand at JGI? A: It takes a few months to go from start to finish, i.e., QC to separation to library … separating the 13 CO2 that we’re using to label the leaves from the soil. So we have a separate air chamber around the …
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Fishing for Novel Cellulose Degraders
… When they tested the screen method on a microbial community from geothermal hot springs, they uncovered a novel … performance, and then applied it to environmental samples from the Great Boiling Spring Geothermal Field in Nevada. To validate the predicted cellulases from their captured genomes, the team then used DNA …
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Integrating Experimentation with Data
… Environmental Microbiomes Biodesign and Synthetic Biology AI/ML-enabled Laboratory Automation, Data …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Creating an Energy Market for Miscanthus
… Miscanthus will need some upgrades. In this episode, hear from scientists working on understanding Miscanthus biology and the economic terrain to help make the plant a …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… 21, 2020, will be included in the next review. Q&A from the Webinar: Q(uestion): Can people can mix and match … a principal investigator (PI). There is no restriction from JGI’s side, but do check with your institution, as …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much … A:  DNA modification detection can only be performed from “regular” PacBio, since the low-input protocol involves …
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