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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary across the global ocean. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In … array of combinations, are unremarkable, save perhaps for the absence of all the other letters of the alphabet. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Introducing New Members of the JGI User Executive Committee
… new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist … aims to help overcome common user bottlenecks in access, analysis and sharing of JGI-generated data. She is also …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than … most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … — including the eelgrass genome assembly that enabled analysis of the whole genome duplication event — …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of … The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … key to discovering new antiviral medicines and treatments for infectious disease. Streptomycetes are also abundant in …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, … of 250 plant genomes and has been under active development for over 5 years, provides users with the genome browsers, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly … metabolites and associated genes are great resources for bioremediation, new agricultural applications or … to its gene hoarding and those long genes. And gene family analysis showed that genes directing development of …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University … nearly 100,000 single root cells and combining the information with previously published datasets. The work was  … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species beyond …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… The  National Ecological Observatory Network (NEON) is a network of … Through the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  … State University, which archives and makes available for research over 100,000 samples and specimens of over 60 …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … this. Although my interest was always laid in sort of, in analysis. So sort of more computational generally. But yeah, …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy … interested in conducting a controlled drought and multi-isotope labeling experiment, and the data will allow them to …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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