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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … The more the better. We want to put at least a microgram of DNA in the tube so you’d need at least 2 micrograms in … have preconstructed SIP Narratives, but this is on the roadmap and will be piloted in the near future. 5. Q: How …
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … community and consider new initiatives in areas such as functional studies (e.g., a functional encyclopedia building … with the election results, Ashley Shade and Jason Stajich completed their service on the UEC and we thank them for …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria … podcast , where she talks about this community resource. ) “Most people study actinomycetes because they produce a very … in the United States, and is working to address some of the most pressing challenges of our time. For more information, …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … components of lysed cells. By separating the production of enzymes (during growth) and the biochemical production … one of the study’s senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the …
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Busting the Unbreakable Lignin
… New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … little exception, organisms have figured out how to create enzymes that break these components down into glucose. It’s … using magnetic fields to diagnose electronic structure and functionality on the atomic level, was generated at JBEI and …
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Unexpected host dependency of Antarctic Nanohaloarchaeota
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … the JGI, allowing the research team to conduct association mapping, linking genes to traits. One of the team’s findings …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence 1000 …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play … in the United States, and is working to address some of the most pressing challenges of our time. For more information, …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … Flagship Plants , on the short list of plant genomes deemed most important to DOE mission and plant science. The work … the switch away from shattering. “That was one of the most exciting things for me as a computational biologist. …
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An Integrated Dataset to Understand Ecosystem Interaction
… data set will help identify how different elements of the ecosystem interact and respond to changes in the … their genetic diversity. They hold economic value as both biofuel feedstock and their role in carbon sequestration. … and Oak Ridge National Laboratory, dating back to the first complete genome of a poplar tree in 2006. …
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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