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iPHoP: A Matchmaker for Phages and their Hosts
…   To understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … new program called iPHoP (pronounced “eye-pop”,  freely available online ). It combines and evaluates multiple …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint Genome Institute this … the Genomes OnLine Database (GOLD) administered by the DOE JGI. T.B.K Reddy, Kaushal‘s mentor, described his student’s …
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Improved High-Quality Draft Genome Sequence of the Eurypsychrophile Rhodotorula sp. JG1b, Isolated from Permafrost in the Hyperarid Upper-Elevation McMurdo Dry Valleys, Antarctica
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JGI-UC Merced Interns Share Their 2021 Experiences
… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science presentation … Polymorphisms Created by Transposable Elements … Evolution of the Mitochondria Internship …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system … researchers led by David Weston of Oak Ridge National Laboratory make the case for  sphagnum as “an unparalleled …
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2021 Progress Report
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JGIota: A Surprise for Chloroflexota — The First Flagella!
… Hear how their recent work revealed more about the history of the Chloroflexota phylum and a new way of moving: a tail-like flagella.  …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the … Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops … into building productive infrastructure in close collaboration with the local scientists. As the lead of the …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science … microsporus (Rm) and Burkholderia endobacteria, a collaborative effort led by researchers at Cornell University … the National Science Foundation and the National Institutes of Health. The work conducted by the U.S. Department of …
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers set out to Yellowstone National Park to study how cyanobacteria are living, …
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Methane Makers in Yosemite’s Lakes
… the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see how climate change affects freshwater …
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software …
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