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Honey Bee Gut Microbiota Divvy Up Dinner
… in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: who’s responsible for what biochemical processes? Now, an international team …
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JGI announces 2024 New Investigator portfolio
… circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and … find a list of researchers whose proposals were accepted for 2024. Harnessing the JGI’s  resources, these researchers … of desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered … establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a research article. Speakers will …
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Webinar: PhycoCosm Tutorial
… again how did you pick genomes to be on the genomes portal? For the taxa I work on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided by Sara 4.  Q(uestion): Are all CSP … pipeline then added to PhycoCosm (if relevant)? A:  For every genome that we sequence, we provide full analysis …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments … and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The …
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Mike Sneddon
… the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team … and scientists builds and operates the data and compute platforms and bioinformatics annotation pipelines that support JGI’s portals, … X. Metagenomic library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 …
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … that were missed using traditional approaches. This novel form of intermediate expression, when used in addition to … Metabolic engineering could lead to sustainable pathways for making high-value bioproducts including biofuels. In …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … Input & sequencing Q(uestion): How much DNA is needed for “regular” vs the ultra-low input library creation … not strictly necessary, as you can get finished quality microbial data polishing with just the PacBio data     …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Australia but is increasingly farmed in other countries for essential oil production. The recent assembly of two … the conservation and evolution of the genes responsible for terpene synthase (TPS) enzyme production. This family of enzymes is critical to the synthesis and broad diversity of terpenes. Until recently, studies of the TPS …
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The JGI announces FY25 awardees for our Community Science Program Annual Call
…   The JGI is excited to announce the 18 scientists selected for our 2025 Community Science Program Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped … contribute to global biogeochemical cycles. Additional efforts in metabolic engineering and biocatalyst design will …
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Computationally Classifying Fungal Lifestyles
… known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … Genomes Project, which aims to provide a reference genome for each of the fungal families. Researchers had access to … genomes, they also built a high-quality phylogenetic tree for  Dothideomycetes . The data allowed the team to …
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