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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, … bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah Bagby (Case Western Reserve University) and Simon Roux (JGI) as they talk about their recent work on a time …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence … DOE Joint Genome Institute (JGI), and the Energy Sciences Network (ESnet) have been recognized for outstanding … to assemble, for the first time these large environmental  microbial data sets for JGI users, which include projects …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using microbial understanding to formulate a vaccine for …
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MGM Workshop at Fisabio Summer School 2026
… School.  The workshop is addressed to students and professionals of biology, biomedical research, the health sciences … related fields who are interested in learning and sharing concepts, tools and research results in genomics, … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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CalTeach
… of STEM teaching & learning. Their coursework focuses on STEM pedagogy, educational theory and promoting diversity, equity, and inclusion, … industry-level work and coding. Receive mentorship, network and gain connections with lab staff. Increase their …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory … current faculty. Applying faculty members may invite up to two student participants from the faculty member’s home …
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Extracting the Secrets of Secondary Metabolites
… further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not essential for growth … in response to hardship or competition. They make up the foundation for a slew of vital products in biotechnology, … The work conducted by the US Department of Energy Joint Genome …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the … that led to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples … Program, and already available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Nikos …
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A Plant Root Atlas for Tracking Developmental Trajectories
… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly … of single-cell datasets in plants and provides a foundation for still larger efforts in diverse plant species … Cole, have been leading these efforts, which included two  workshops with resulting reports and a  perspective …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … its peak, all the machines were switched off. Over the next two weeks, they were crated, shipped to, and then installed … and stacked for transport. When considering how to do similarly large moves at the main Lab campus, consult  …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … with the University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New … because in many plants chromosomes are present in more than two copies, a condition known as polyploidy. The multiple …
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JGI@25: Building a Better Bean
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help … Africa. For smallholder farmers — those with less than two hectares of land — common bean is often a food at every …
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