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A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly … bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important … has already demonstrated CRAGE as a versatile engineering system that allows scientists to conduct genome-wide screens …

… a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint appointment with the … University of California, Berkeley. Nowadays, Session is an Assistant Professor at Binghamton University in New York. … came up with this new method, Session mentioned that the analysis for determining the evolutionary history of …

Proposals aim to sequence and annotate genomes from Antarctica to Africa to global … accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored in Oracle databases, Berkeley DB and files in …

… they often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part of the … to decompose hardwoods on every continent besides Europe and Antarctica. A  new analysis takes a  genomic look at Lentinula samples from …

The Science As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant pathogens known to …

… single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the microbiome … the bridge to help scientists and researchers achieve their analysis goals. Offering this tool establishes the JGI as a … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun …

Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials … that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis harnesses carbon captured …

Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by Igor Grigoriev, …

… “but we really first heard about the JGI synthesis grant during a presentation that [DNA Synthesis Science Head] … Genomics (formerly DNA Synthesis) call, and he noted the data had driven his lab’s focus on guide RNA library … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching genomic data at a computer; a few had the opportunity to spend time …