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2022 Progress Report
Pictured is a timelapse of the Integrative Genomics Building …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand how … gases from Arctic permafrost. But to see what they’re doing, he first needs their DNA.   …
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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in … Collaborate With a U.S. DOE User Facility: Learn About Available Expertise and Resources, Open-Call Opportunities, … 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center Rm …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have … sequence. At the time, the vital global source of both protein and oil was also the largest plant project completed … sequence and ASR in this JGIota, a Genome Insider podcast minisode.)  In 2016, the JGI accepted a proposal from …
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Dispatches From JGI Interns
Every summer, the flagship JGI-UC Merced Internship Program invites undergraduate and graduate … research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives …
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JGI Announces 2023 Community Science Program Awardees
Congratulations to the proposers of the 19 proposals selected for … Program call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … five areas of emphasis: genes to function, plant and algal functional genomics, inter-organismal interactions, …
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Chomping Toward Better Plastic Recycling
We know all kinds of things about plastic – except, how to break it down for recycling. But some … a look at how these critters process plastic, to improve plastic recycling by following their lead.            …
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Party in the Rhizosphere
There’s a party in the soil, and microbes are the VIPs. They’re feasting on the compounds that …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the specialized software and …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The … Center for Biotechnology. Most plants are diploids with two copies of each chromosome, one inherited from each …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at … predict how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging … because in many plants chromosomes are present in more than two copies, a condition known as polyploidy. The multiple …
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