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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… di-GMP (Guanine Monophosphate) is found in nearly all types of bacteria and interacts with cell signaling networks that … functions. It plays an important role in regulating microbial cellulose production and biofilm formation, which … cyclic di-GMP in bacteria through work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic …
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Honey Bee Gut Microbiota Divvy Up Dinner
… Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … But scientists have wondered exactly how the microbial community carries out its helpful metabolism: … authors think this might have to do with the differences in lifestyle: honey bees need ample sugar to make honey that …
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Year in Review: JGI’s 2018 Progress Report Available Now
… The latest edition of the JGI Progress Report highlights notable research and … scientific collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — but not doors — and robots handle a bunch of benchwork. …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in …
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A Powerful Technique to Study Microbes, Now Easier
… Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that measure microbial activity in soil. Now, the researchers and robots …
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Leo Baumgart
… his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the Sequencing Technology … binding sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and … BS in Biochemistry and Cell Biology, University of California, San Diego PhD in Molecular Biology, …
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Operating Expenses
… FY2025 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … assumed, due to the wide and varied geographic footprint of the plant, that eelgrass began colonizing the oceans  … the last 40,000 years. The Impact Eelgrass represents one of the largest carbon sinks in the ocean — occupying just …
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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … available metagenomic datasets in JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) data suite—which …
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