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Viruses Reprogram Cells into Different Virocells
… on, and around the planet is an astronomical figure, and yet viruses outnumber them. In the ocean, viruses outnumber … approach to infecting and metabolically reprogramming the bacterial host, which was transformed into two very … different infection outcomes. reprogrammed the bacteria’s central carbon and energy metabolism, to obtain …
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SPRUCE-ing Up Science
… Duke University, published their research related to how bacteria that colonize the roots of sphagnum work to … computer science, to reveal clues about how microbial and bacteria communities influence the carbon-sequestering …
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Crysten Blaby-Haas
… on using comparative genomics to predict gene function in bacteria and leveraging molecular biology and reverse … site ties heme availability to carbon metabolism in cyanobacteria. Nature Comm 15:3167. Hammack AT, Blaby-Haas CE. …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Schmutz is the Plant Program Lead at the JGI. Sarah:  Why is a resource like this important to the field of plant … Sarah:  Have you all learned anything from the data yet? Are there any specific examples you can share? Avinash: …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… used at all, so to speak. They could just be switched off.” Yet, after extensive study, Hatzenpicher and his team were … pathways in these microbes — though those questions cannot yet be answered definitively.  These studies do prove …
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JGI@25: The Little Alga That Could
… sustainable biofuel production. The JGI published a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . At the … a Harvard postdoc. While she had intended to work on cyanobacteria, fate stepped in when a fire at the lab relegated …
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Microbial Genomics & Metagenomics (MGM) Workshop
… workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data … with existing bioinformatic methods to bridge the gap from sequence to biology. …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required …
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A Sorghum Pangenome Opens More Doors to Discovery
… development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and … high-quality reference genomes. By cataloguing a genome sequence for a line of sorghum, reference genomes have … Now, researchers have brought many reference genomes and sequences together at once, producing a pangenome resource …
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Sequencing and Analysis of the Entire Genome of the Mycoparasitic Bioeffector Fungus Trichoderma asperelloides Strain T 203 (Hypocreales)
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Draft genome sequences of strains CBS6241 and CBS6242 of the basidiomycetous yeast Filobasidium floriforme
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Draft Genome Sequence of Yokenella regensburgei Strain WCD67, Isolated from the Boxelder Bug
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