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… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, …

… food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial …

… For many scientists, the culmination of their work into a written report that is published … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … the factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” …

… for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic code of sugarcane, … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the Office of Science of the USA Department of Energy operated under Contract No. DE-AC02-05CH11231 with Lawrence …

… is through a method called Multiple Displacement Amplification, and most genomes that were acquired through it were … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … attempt to put them back into the original genomes. These metagenome-assembled genomes (MAGs) that came from shotgun …

… 2017 Summer Interns Share Highlights of their time at the JGI …

… and implementing new technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci …

… sequence. For the highly polyploid sugarcane, an international team of researchers has successfully assembled a … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … sugarcane cultivars are hybrids, each with more than 100 chromosomes; assembling a sugarcane genome is incredibly …

… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass …

… grasses using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties that diverged over a million years ago. The hallii variety … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … the fungal tree of life to date, involving more than 500 species of fungi. The Impact Interactions between plants … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like …