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Building Wet and Dry Lab Skills
… by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and Zyiah Mikes … mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium … about how to analyze data. Zyiah Mikes : Dr. Yi Zhai is our mentor for our experimental work or our wet lab stuff. …
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An Addiction Crucial to a Fungus’ Reproduction
… regulate key components of its reproductive machinery The Science To better understand how beneficial organisms … genome (Rm ATCC 52813) as part of the 1000 Fungal Genomes project. As reported in the November 29, 2017 issue of … As these oil-producing fungi are potential sustainable sources of alternative fuels, so understanding …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint … Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their …
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Integrating Experimentation with Data
… Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) at their joint meeting! … JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to advancing research in bioenergy and environmental science. They provide the scientific community access to …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that …
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JGI@25: The Little Alga That Could
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s …
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A User-Centered Approach to Accessing JGI Data
… limited to: Public data: datasets associated with completed projects that are eligible for public release, have … For IMG & Mycocosm: Data that is associated with an ITS project ID (AP or SP) Q: What JGI Data Policy considerations … and NMDC? A: We have reached out to KBase regarding use of our search API. They have expressed an interest in using …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … collaboration with the JGI Algal Program, which explores genomics of algal diversity and biology to support basic … Program makes genomes and multi-omics data from JGI CSP projects publicly available at the PhycoCosm portal . …
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Green Algae Reveal One mRNA Encodes Many Proteins
… reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples … zofingiensis . “I was scrutinizing the genes of one of our species of algae and kept seeing what looked like … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab and the …
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Georg Rath
… the JGI, he has been working on the boundary of life science and computational science with notable stops at … people and transparency and a staunch supporter of open source development processes. This expresses itself in the … from JGI’s science and production sequencing programs. …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
… yeast’s native chromosomes with synthetic versions. This project has turned out to be an international collaboration, …
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