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… development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, … high-quality reference genomes. By cataloguing a genome sequence for a line of sorghum, reference genomes have …

… Their talks shed light on how the JGI was established, all that it has contributed, and what they’re excited about in … so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many more meetings and … idea was to put together a ‘Best of the Best’ genome sequence list, which I found utterly frustrating and …

… data repositories of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by the JGI — so …

… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … Cas9 needs guide RNA to lead it to the correct sequence to snip — but not all guides are effective. To … approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the endonuclease where to cut, …

… low diversity hot spring sediment sample. Their work showed that single cell genomics can add significant value to the … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of genomic sequences. A complementary approach to this is single cell …

… workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data …

… genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their … within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes we've sequenced, we've only scratched the surface.” The study, …

… communications, their schedules were filled with trainings that they later reported were incredibly valuable to their … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor …